The spare tire on a Henry J or Allstate went into the storage compartment area along the inside driver side where the "trench" for the lower part of the tire would go. The picture showing the fold-down rear seat back in a HJ with deck lid shows this spot. As for the tools, they went in various places, I think reflecting where a dealer wanted to put the parts in many cases. The other photo is one of a group taken by Willys-Overland for their competitive intelligence file that shows the spare in place on a non deck-lid HJ.